Browse of TCMCG009C23706 protein

CDS

Accession Number	TCMCG009C23706
gbkey	CDS
Protein Id	XP_030482353.1
Location	complement(join(27668897..27669007,27669101..27669184,27669323..27669556,27669650..27669805,27669897..27669993,27670682..27670861,27670970..27671358,27671604..27671702,27672283..27672466,27672559..27672704,27672803..27672863,27673844..27674468,27674853..27675003,27675125..27675199,27675349..27675499,27675702..27675802,27675892..27675975,27676579..27676727,27676818..27676986,27677782..27677883,27677979..27678053,27678132..27678212,27678569..27678675,27678889..27678954,27679046..27679191,27679319..27679453,27680178..27680389,27680540..27680725,27681042..27681164,27681277..27681390,27681877..27681969,27683021..27683092,27683198..27683320,27683415..27683527,27684398..27684497,27684616..27684789,27685019..27685159,27685740..27685948,27686067..27686229))
Gene	LOC115699204
GeneID	115699204
Organism	Cannabis sativa

Protein

Length	1926aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA560384
db_source	XM_030626493.1
Definition	rRNA biogenesis protein RRP5 isoform X2 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTCCGCCTTCGAAGAAATTTCAGAAGAAGCCTAAGGATGCCACAAAGTTTAATAAATCTTCCAAGCCGGCGTTTAAAGCGAAGAAGGAGCAAAACGGTCCCGCCAAGTCTGAGGCCCTTGCTTTGCAGATAGAAGATGAAGTTCCTGATTTTCCTAGAGGTGGAGGAAGTTCTCTGAGTCGAAAAGAACGTGAGGAAGTTCGGGCTGAAGTGGATGCCCAGTTTGAGGTGGAAGAGCAGGAGCTGAAGACAAAGAAGAAGAGGAAGAATTTGCCGAAGATTAGTCAGGAAGAGGATGATTTGGGGTCCTTATTTGGTGGCGGTATTACTGGCAAACTGCCTCGATTTGCTAATAAGATCACTTTGAAGAATATATCCCCCGGAATGAAGCTTTGGGGAGTTATTGCTGAAGTAAATGAGAGAGACCTCGTAATAAGTCTACCAGGGGGTTTAAAAGGTTTAGTTCGAGCCTCCGATGCTCTGGATCCTATTTCAGATACCGAAGTTGAGAGCATAGCAGATAATGTGCTGCCCAGTGTCTTCCACGTTGGGCAAATGGTAGCTTCTGTGGTTTTACACCTGGATAGTGATAACAAAGAGAGTGGCAAAAGGAAGATCTGGCTTTCCCTGCGTCTTTCTTTGTTGCACAAGGGCTTCATGTTGGATTCTATTCAAGAAGGCATGGTCCTCAGTGCTTATGTGAAAAGTATTGAAGACCATGGTTATATTCTTCATTTTGGTTCGACTTCATTCACCGGGTTCTTGCCTAGAGAGAGCAAAAATGCCAGCTCTGAGATTAACACTGGACAACTTCTACAGGGCATTGTTGGAAAAATTGATAAAGCCCATAGAGTTGTTTATTTAAGTTCTAACCCAGACACCGTGTCAAAATATGCGACCAAGGATGTTAAAGGTATTTCAATTGATGTTCTTACTCCCGGCATGATGGTTAATGCTCGTGTACAATCAACCCTTGAAAATGGTGTTATGTTATCATTTCTGACATACTTTACTGGAACTGTTGATATGTTTCACTTGCAAAGTAGTTTTGCTACTTCAAATTGGCAGGATGATTACAATCAAACTAAGAAGGTTAATGCTCGAATATTGTTTATTGATCCTTCAAGTAGAGCTGTTGGTTTGACTCTGAATCCACATCTTGTTCAGAACATGTCTCCTCCGTCACATGTTAAAGTTGGAGATATATATGAAGACTTGAAAGTGGTCAGAGTTGATAGAGGGTTGGGTCTTCTCCTTGAAATACCAACCTCACCGGTTCCTACACCGGCGTATGTTAGTATATCTGATGTGACAGAAGATGGAATTCATAAGCTTGAAAAGAAGTTTAAGGAAGGTAGTCGCGTCCGTGTTAGGATTCTCGGGTTTAGGCACTTGGAAGGGGTGGCTACTGGAACTCTGAAGGCTGGTGCTTTCGAAGGGTCAGTGTTCACTCACTCTGATGTCAAGCCTGGGATGATTGTGAGGGCCAAAGTAATAGCTGTCGAACCCTATCAAGCAATTGTGAAATTCTCAGGTGGTATTAAGGCTCTTTGCCCACTTCGCCATATGTCTGAATTTGAACTTTCTAAGCCTGGAAAAAAGTTTCAGGTTGGAGCTGAGCTGGTGTTTCGTGTACTTGGTTGCAAGTCTAAGAGGATAACTGTTACACACAAGAAAACACTAGTGAAATCTAAACTTCCCATTGTTAGCTCTTATGCTGATGCAATTGATGGATTAATAACACATGGATGGATAACAAAGATTGAGGAACATGGATGCTTTGTTCGATTTTACAGTGGTGTCCAGGGATTTGCTCCAAGATCTCAACTCGGTTTAGACCCAGGGAGTGATCCTAGCTCAATATATCATGTTGGACAAGTGGTCAAATGTAGGATAATAGGTCCTGTTTCAGGATCAAGACGCATCAATCTTAGTTTCATAATAAAGCCTTCAAGGGTTTCTGAGGATGATGTTATCAAGATTGGTACACTTGTTTCAGGAGTTGTTGATGTGGTAACTCCAAATGCAGTAGTAGTTTGTGTTAATGGGAAAAATTACTTGAAGGGTACAATTTCAACTGAACATTTGGCTGATCATCAAGGGCAAGCTGATATGCTTAAGTCAGTACTAAAGCCTGGATTTGAATTTGATCAGTTGGTGCTACTAGATAATGAAAGCAACAATTTGAAACTCTCTGCAAAATATTCTCTTGTCAAGTCTGCTGAGCAGCTTCCATCAGAGATCAGTCAGATCCGCCCTAACTCTGTTGTCCACGGCTACATCTGCAACCTGATTGAAACTGGCTGCTTTGTTCGCTTTCTTGGTCGTTTAACTGGTTTCTCTCCTAGAAATAAGGCAACTGATGATTACAAAGTCAATCTTCCTGAAGTCTTTTACATTGGACAGTCCGTGCGCAGTAATATACTCGATGTTAATAGTGAAACCGGTAGAGTAACAGTTTCATTGAAGCAGACATCTTGCTCTTCAACAGATGCATCATTCATGCAAGATTTCTTTCTTTTGGAGGAAAAGATTGCCAATCTACAATCCTTGGGTTCCAATGGATCTGAGTTAAACTGGACTGAGGGATTTAACATTGGCTGTGTTGTTGAGGGAAAAATACAAGAAACAAAGGATATTGGAGTGGTTGTGAGCTTTGACAAGTATAATGATGTCTTGGGTTTTATAACCCCCCATCAGCTAGCTGGTATAATAGTAGAGACAGGCTCCATTATCCAGGCAACTGTTCTAGATGTTTCAAAAATAGAGCATTTGGTCGACTTGTCTCTCAATAAAGAGTTCATTGCCAAAAGCAGAGAAGAAAGCTCTCACAGCCAAAGCCATAAAAAGAAGCGTAAACGACAAGCATCCAAGGACTTGGAGGTTCACCAGACAGTTAATGCTGTTGTTGAAATTGTCAAAGAAGATTACCTGGTTCTCTCAATACCCGAATATAATTATGCCTTAGGATATGCATCAAAATCTGACTATAATGTCCAGAAGTTTCCTCATAAACAATTTCTGAATGGACAAAGTGTTGTTGCCACTGTTATGGCTCTTCCAAGCCCTTCAACAGCAGGGAGGCTACTGTTGCTTCTTAAATCGATCAGTGAATCTGAAACATCAAGCTCAAAAAGAGCAAAAAAGAAGTCAAGCTACACTGTGGGATCTCTTGTTCAGGCAGAGATTACTGAAATCAGGCCACTTGAACTAAGGTTGAAATTTGGAATTGGATTCCATGGGCGTGTTCACATAACAGAGGTAAATGATGATAATGTTTCAGAAAATCCATTTTGTAACTTTAGAGTTGGGCAAACAGTGAATGCACGGATTGTTGGAAAGGCTACTAATTCAGATAGCAAAAAGAATAGCTACCAGTTTGATCTTTCCATGAAACCGAGTGTTCTCTCAGAGGAGAAGCTTATGATTGAAAAGTTTGATTTCTCTTCTGGACAATTTGTCACTGGTTATGTATATAAAGTGGACAGTGAATGGGTGTGGCTAAATATATCTCGACATGTGAGAGCTCAACTATTTATTCTCGACACTTCATGTGAGCCTAGTGAACTTCATCAGTTCCAGAAGCAATTTCATGTGGGAAAAGTTGTATCTGGTCATGTATTAAGTGTTAACAAGGATAAAAAGCTATTGCGGCTTGTTCCACATAGTTTCCCTGATAAAGCTTCAGCTGGAGTTTCAACGATAGATGATAAACAAGCTTCCGTTTCAAATGAAAATGTTACTGCTCATATTTGTGAAGGATGTATTGTGGGTGGCAGAGTATCCAAAGTACTTCCCGGTGTTGGTGGATTAATTGTGCAAATTGGTCCTCACACGTATGGAAGGGTTCATTATACAGAACTTACTGACTCATGGGTGTCAGATCCATTGTCCGGATATCATGAAAGAGAGTTTGTCAAATGCAAGGTCCTTGAGATCAACCAATCTGCCAAAGGAACATTTGAGATTGATTTATCATTAAACTTATCAACGAAAGACATTATTTCTCAACGTCCAAATGATTCTTGCGAAAATATGCCCACTAAAACCAAGTGTGTGGAAAAGATTGAAGATCTTCATCCTAATATGGAGATACAGGGTTATGTTAAAAATGTTACTCCAAAAGGTTGTTTCATTTTTCTCTCCCGGAGACTTGATGCCAAAATTCTTCTTTCAAATTTATCTGATGGATTTGTTGATGACCCTGTCAAAGAATTCCCCATTGGTAAACTTGTGACTGGCAGGATTTTATCTGTGGAACCTCTATCAAAGCGAGTTGAAGTTACATTGAAGACCATGGGTGCAAGCAGTGGACCAAAATCAGATATTACTAATTTAAGTAGCCTGCACGTGGGAGATATTATTTCTGGCAGGATTAAGCGGGTGGAGAAGTATGGTTTATTTATCTCTATTGACAACACCAACCTGGTTGGATTGTGCCATATCTCAGAGCTTTCAGATGACCGTACTGAGAATATTGAAAGCAAATACAAAGCACGTGAGAAAGTGAGAGCAAAAATATTGAAGGTGGATGCAGAAAGAAATCGAATCTCTCTCGGAATGAAGAATTTCTATGTTCTAGAAAATGATGATGCTGAGGAATCTTCAGACCAAGTGGCTGATGCAACCATTAACAACAGTTCTGTAAATGATACTAAGTTGGTATCATTACCTGAAAGTGGTTTTCAAGGAATCCACAATATGGATGTTGAATGCCCAAGTTTAAATTTGGAAATCCCCATTCTTGCACAAGCGGAATCCAGGGCTTTTGTTCCTCCACTTGAAGTGGCCCTCGATGATATATACCAGGAAAATGTGGATGGTATAACTATTCAAAATCAAGAGCTTATAAATGTTACAGACACCCTAGATGAAAAGAGCAAGAGAGAAGCAAAGAAGAAAGCAAAGAAAGAGAGGGAGAAAGAAATTAGAGCTGCTGAAGAAAGATTACTGGAAAATGATATGCCAAGAACTGCTGAGGAATTTGAGAAACAAGTTAGAAGTTCTCCAAATAACAGCTATTGGTGGATAAAATTCATGGAATTTGCTGAGTCAACCATGGCAGACGTTGAAAAAGCTCGTTCTATTGCTGAAAGGGCCTTGCAAACAATAAATATCCGAGAAGAGAATGAGAAGCTCAATATTTGGGTGGCTTATTTTAATTTGGAAAACGAACATGGAAATCCTCCTGAGGAGGCTGTTTTGAAAGTATTTCAAAGGGCATTGCAATACAATGATCCCAAAAAAGTTTATATAGCACTATTGGGGTTGTATGAAAGGACAAAGAAACTTGGGCTAGCTGATGAACTTGTTGACAAGATGACCAGAAAGTTCAAGCAGTCATGCAAGGTTTGGTTACGGCGGGTGGACAGGCTCTTGGAACGACAACAGCAAGATGCAGTTCAGGCTGTTATCAATCGAGCGCTGTTAAGCCTTCCACGTCACAAACACATAAAGTTCATCACACAGACGGCTATTCGTGAGTTCCACCGTGGTGTTCCTCATATGGGAAGATCCATGTTTGAAGGAATTTTGAAAGAATATCCCAAGAGAACAGACTTATGGAGCATTTATATTGATCAAGAGATTCGACTTAAAGATGTGAATGTGATCCGTGCACTATTTGAGAGGGCGACTTGTTTGAGTCTTGCACCTAAAAAAATGAAATTCTTATTCAAAAAGTATTTGGAGTATGAGAAGTCTCTTGGTGACGAGGAGAGGATTGAGCATGTCAAAAAGAGAGCAATGGAATACGTTGAGAGCACACTAGCAGAGTAA

Protein:   MAPPSKKFQKKPKDATKFNKSSKPAFKAKKEQNGPAKSEALALQIEDEVPDFPRGGGSSLSRKEREEVRAEVDAQFEVEEQELKTKKKRKNLPKISQEEDDLGSLFGGGITGKLPRFANKITLKNISPGMKLWGVIAEVNERDLVISLPGGLKGLVRASDALDPISDTEVESIADNVLPSVFHVGQMVASVVLHLDSDNKESGKRKIWLSLRLSLLHKGFMLDSIQEGMVLSAYVKSIEDHGYILHFGSTSFTGFLPRESKNASSEINTGQLLQGIVGKIDKAHRVVYLSSNPDTVSKYATKDVKGISIDVLTPGMMVNARVQSTLENGVMLSFLTYFTGTVDMFHLQSSFATSNWQDDYNQTKKVNARILFIDPSSRAVGLTLNPHLVQNMSPPSHVKVGDIYEDLKVVRVDRGLGLLLEIPTSPVPTPAYVSISDVTEDGIHKLEKKFKEGSRVRVRILGFRHLEGVATGTLKAGAFEGSVFTHSDVKPGMIVRAKVIAVEPYQAIVKFSGGIKALCPLRHMSEFELSKPGKKFQVGAELVFRVLGCKSKRITVTHKKTLVKSKLPIVSSYADAIDGLITHGWITKIEEHGCFVRFYSGVQGFAPRSQLGLDPGSDPSSIYHVGQVVKCRIIGPVSGSRRINLSFIIKPSRVSEDDVIKIGTLVSGVVDVVTPNAVVVCVNGKNYLKGTISTEHLADHQGQADMLKSVLKPGFEFDQLVLLDNESNNLKLSAKYSLVKSAEQLPSEISQIRPNSVVHGYICNLIETGCFVRFLGRLTGFSPRNKATDDYKVNLPEVFYIGQSVRSNILDVNSETGRVTVSLKQTSCSSTDASFMQDFFLLEEKIANLQSLGSNGSELNWTEGFNIGCVVEGKIQETKDIGVVVSFDKYNDVLGFITPHQLAGIIVETGSIIQATVLDVSKIEHLVDLSLNKEFIAKSREESSHSQSHKKKRKRQASKDLEVHQTVNAVVEIVKEDYLVLSIPEYNYALGYASKSDYNVQKFPHKQFLNGQSVVATVMALPSPSTAGRLLLLLKSISESETSSSKRAKKKSSYTVGSLVQAEITEIRPLELRLKFGIGFHGRVHITEVNDDNVSENPFCNFRVGQTVNARIVGKATNSDSKKNSYQFDLSMKPSVLSEEKLMIEKFDFSSGQFVTGYVYKVDSEWVWLNISRHVRAQLFILDTSCEPSELHQFQKQFHVGKVVSGHVLSVNKDKKLLRLVPHSFPDKASAGVSTIDDKQASVSNENVTAHICEGCIVGGRVSKVLPGVGGLIVQIGPHTYGRVHYTELTDSWVSDPLSGYHEREFVKCKVLEINQSAKGTFEIDLSLNLSTKDIISQRPNDSCENMPTKTKCVEKIEDLHPNMEIQGYVKNVTPKGCFIFLSRRLDAKILLSNLSDGFVDDPVKEFPIGKLVTGRILSVEPLSKRVEVTLKTMGASSGPKSDITNLSSLHVGDIISGRIKRVEKYGLFISIDNTNLVGLCHISELSDDRTENIESKYKAREKVRAKILKVDAERNRISLGMKNFYVLENDDAEESSDQVADATINNSSVNDTKLVSLPESGFQGIHNMDVECPSLNLEIPILAQAESRAFVPPLEVALDDIYQENVDGITIQNQELINVTDTLDEKSKREAKKKAKKEREKEIRAAEERLLENDMPRTAEEFEKQVRSSPNNSYWWIKFMEFAESTMADVEKARSIAERALQTINIREENEKLNIWVAYFNLENEHGNPPEEAVLKVFQRALQYNDPKKVYIALLGLYERTKKLGLADELVDKMTRKFKQSCKVWLRRVDRLLERQQQDAVQAVINRALLSLPRHKHIKFITQTAIREFHRGVPHMGRSMFEGILKEYPKRTDLWSIYIDQEIRLKDVNVIRALFERATCLSLAPKKMKFLFKKYLEYEKSLGDEERIEHVKKRAMEYVESTLAE